Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Gm7488-201ENSMUST00000117148 684 ntBASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Gm15693-201ENSMUST00000120470 637 ntBASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Gm7730-201ENSMUST00000212486 454 ntBASIC15.76■□□□□ 0.11
Fam196aQ3USH1 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.76■□□□□ 0.11
Fam196aQ3USH1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Gm9794-201ENSMUST00000202370 423 ntBASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Fam196aQ3USH1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Gm16198-201ENSMUST00000118766 670 ntBASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Fam196aQ3USH1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Gm6415-201ENSMUST00000118488 348 ntBASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Gm13453-201ENSMUST00000118708 357 ntBASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Gm38294-201ENSMUST00000192831 381 ntBASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Fam196aQ3USH1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms