Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Gm27680-201ENSMUST00000184192 160 ntBASIC18.55■□□□□ 0.56
Col5a2Q3U962 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col5a2Q3U962 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.54■□□□□ 0.56
Col5a2Q3U962 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Gm7653-201ENSMUST00000214567 508 ntBASIC18.54■□□□□ 0.56
Col5a2Q3U962 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.54■□□□□ 0.56
Col5a2Q3U962 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col5a2Q3U962 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Gm14719-201ENSMUST00000121891 340 ntBASIC18.53■□□□□ 0.56
Col5a2Q3U962 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.53■□□□□ 0.56
Col5a2Q3U962 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.53■□□□□ 0.56
Col5a2Q3U962 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Gm7730-201ENSMUST00000212486 454 ntBASIC18.53■□□□□ 0.56
Col5a2Q3U962 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.53■□□□□ 0.56
Col5a2Q3U962 Gm10154-201ENSMUST00000084445 354 ntBASIC18.53■□□□□ 0.56
Col5a2Q3U962 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col5a2Q3U962 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Gm28630-201ENSMUST00000187806 498 ntBASIC18.52■□□□□ 0.56
Col5a2Q3U962 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col5a2Q3U962 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.52■□□□□ 0.55
Col5a2Q3U962 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gm25144-201ENSMUST00000179561 110 ntBASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gm25352-201ENSMUST00000179815 110 ntBASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gm8318-201ENSMUST00000182954 872 ntBASIC18.52■□□□□ 0.55
Col5a2Q3U962 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.52■□□□□ 0.55
Col5a2Q3U962 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Col5a2Q3U962 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.52■□□□□ 0.55
Col5a2Q3U962 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col5a2Q3U962 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms