Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.6■□□□□ 0.41
Pdlim7Q3TJD7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim7Q3TJD7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim7Q3TJD7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Grk6-207ENSMUST00000225925 2769 ntBASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Mir6977-201ENSMUST00000184960 64 ntBASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Gm18246-201ENSMUST00000221023 728 ntBASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim7Q3TJD7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.58■□□□□ 0.41
Pdlim7Q3TJD7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim7Q3TJD7 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm22065-201ENSMUST00000103753 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm22066-201ENSMUST00000103761 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24932-201ENSMUST00000103763 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24115-201ENSMUST00000103799 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm22190-201ENSMUST00000103827 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm22191-201ENSMUST00000103831 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24721-201ENSMUST00000103849 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm28018-201ENSMUST00000103869 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm26399-201ENSMUST00000103937 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm25349-201ENSMUST00000177728 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm23616-201ENSMUST00000177797 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm25871-201ENSMUST00000177816 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24752-201ENSMUST00000178240 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24496-201ENSMUST00000178287 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm25649-201ENSMUST00000178476 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm25548-201ENSMUST00000178681 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm23147-201ENSMUST00000178841 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm26095-201ENSMUST00000179270 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm22171-201ENSMUST00000179283 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm23936-201ENSMUST00000179354 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm22619-201ENSMUST00000179516 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm25255-201ENSMUST00000179579 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24755-201ENSMUST00000179691 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm26506-201ENSMUST00000179692 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm25086-201ENSMUST00000179931 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm23243-201ENSMUST00000180047 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24659-201ENSMUST00000180212 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm24169-201ENSMUST00000180244 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm23689-201ENSMUST00000180354 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm27359-201ENSMUST00000184153 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm27785-201ENSMUST00000184268 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm27466-201ENSMUST00000184396 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Gm27703-201ENSMUST00000184836 110 ntBASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms