Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccbe1Q3MI99 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm20049-201ENSMUST00000219950 730 ntBASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccbe1Q3MI99 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccbe1Q3MI99 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Flg-201ENSMUST00000050758 1488 ntBASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccbe1Q3MI99 Efs-202ENSMUST00000227037 2540 ntBASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccbe1Q3MI99 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms