Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Cdx4Q07424 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cdx4Q07424 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Gm24589-201ENSMUST00000116692 94 ntBASIC12.17□□□□□ -0.46
Cdx4Q07424 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Gm10052-201ENSMUST00000168019 960 ntBASIC12.17□□□□□ -0.46
Cdx4Q07424 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdx4Q07424 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdx4Q07424 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.17□□□□□ -0.46
Cdx4Q07424 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Gm7729-201ENSMUST00000050143 801 ntBASIC12.17□□□□□ -0.46
Cdx4Q07424 Gm7461-201ENSMUST00000058918 827 ntBASIC12.17□□□□□ -0.46
Cdx4Q07424 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdx4Q07424 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdx4Q07424 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdx4Q07424 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdx4Q07424 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdx4Q07424 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdx4Q07424 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Sybu-209ENSMUST00000228639 4113 ntBASIC12.15□□□□□ -0.46
Cdx4Q07424 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdx4Q07424 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Gm15794-201ENSMUST00000120182 631 ntBASIC12.15□□□□□ -0.46
Cdx4Q07424 Olfr129-201ENSMUST00000122318 993 ntBASIC12.15□□□□□ -0.46
Cdx4Q07424 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Gm44430-201ENSMUST00000203376 995 ntBASIC12.15□□□□□ -0.46
Cdx4Q07424 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdx4Q07424 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx4Q07424 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms