Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Gm25990-201ENSMUST00000102440 86 ntBASIC14.85□□□□□ -0.03
Nkx3-2P97503 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Gm7506-201ENSMUST00000207758 815 ntBASIC14.85□□□□□ -0.03
Nkx3-2P97503 Gm8655-201ENSMUST00000221159 852 ntBASIC14.85□□□□□ -0.03
Nkx3-2P97503 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx3-2P97503 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Gm4459-201ENSMUST00000118750 468 ntBASIC14.84□□□□□ -0.03
Nkx3-2P97503 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Gm7230-201ENSMUST00000173026 815 ntBASIC14.84□□□□□ -0.03
Nkx3-2P97503 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.84□□□□□ -0.03
Nkx3-2P97503 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx3-2P97503 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx3-2P97503 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx3-2P97503 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.83□□□□□ -0.04
Nkx3-2P97503 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx3-2P97503 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.83□□□□□ -0.04
Nkx3-2P97503 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.83□□□□□ -0.04
Nkx3-2P97503 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nkx3-2P97503 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms