Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim43cP86449 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim43cP86449 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim43cP86449 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim43cP86449 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim43cP86449 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43cP86449 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43cP86449 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim43cP86449 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.1■□□□□ 0.33
Trim43cP86449 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim43cP86449 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Trim43cP86449 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim43cP86449 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim43cP86449 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.1■□□□□ 0.33
Trim43cP86449 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43cP86449 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.1■□□□□ 0.33
Trim43cP86449 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43cP86449 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43cP86449 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim43cP86449 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43cP86449 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44357-201ENSMUST00000195897 142 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm19658-201ENSMUST00000196231 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44367-201ENSMUST00000196836 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44350-201ENSMUST00000197197 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44390-201ENSMUST00000197533 144 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44313-201ENSMUST00000198018 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44486-201ENSMUST00000198508 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44314-201ENSMUST00000199263 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44394-201ENSMUST00000199558 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44484-201ENSMUST00000199873 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44466-201ENSMUST00000200264 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Gm44359-201ENSMUST00000200671 138 ntBASIC17.09■□□□□ 0.33
Trim43cP86449 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim43cP86449 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43cP86449 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim43cP86449 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43cP86449 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43cP86449 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms