Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.02□□□□□ -0.17
SgcbP82349 Gm6257-201ENSMUST00000163864 910 ntBASIC14.02□□□□□ -0.17
SgcbP82349 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.02□□□□□ -0.17
SgcbP82349 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.02□□□□□ -0.17
SgcbP82349 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.02□□□□□ -0.17
SgcbP82349 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.02□□□□□ -0.17
SgcbP82349 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.01□□□□□ -0.17
SgcbP82349 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.01□□□□□ -0.17
SgcbP82349 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SgcbP82349 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SgcbP82349 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Gm8097-201ENSMUST00000117903 829 ntBASIC14.01□□□□□ -0.17
SgcbP82349 Gm13884-201ENSMUST00000118103 829 ntBASIC14.01□□□□□ -0.17
SgcbP82349 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SgcbP82349 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.01□□□□□ -0.17
SgcbP82349 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.01□□□□□ -0.17
SgcbP82349 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcbP82349 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Gm5837-201ENSMUST00000191844 1369 ntBASIC14□□□□□ -0.17
SgcbP82349 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14□□□□□ -0.17
SgcbP82349 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14□□□□□ -0.17
SgcbP82349 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14□□□□□ -0.17
SgcbP82349 AC164629.2-201ENSMUST00000217916 270 ntBASIC14□□□□□ -0.17
SgcbP82349 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Mzt1-203ENSMUST00000227948 952 ntBASIC14□□□□□ -0.17
SgcbP82349 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SgcbP82349 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
SgcbP82349 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SgcbP82349 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14□□□□□ -0.17
SgcbP82349 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcbP82349 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SgcbP82349 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Gm18195-201ENSMUST00000207604 706 ntBASIC13.99□□□□□ -0.17
SgcbP82349 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.99□□□□□ -0.17
SgcbP82349 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms