Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Otx1P80205 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm8825-201ENSMUST00000182565 998 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm4518-201ENSMUST00000182638 718 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.54□□□□□ -0.24
Otx1P80205 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Otx1P80205 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.54□□□□□ -0.24
Otx1P80205 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Otx1P80205 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Otx1P80205 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.54□□□□□ -0.24
Otx1P80205 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Otx1P80205 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Otx1P80205 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otx1P80205 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otx1P80205 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Otx1P80205 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otx1P80205 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otx1P80205 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Gm12497-201ENSMUST00000138778 237 ntBASIC13.53□□□□□ -0.24
Otx1P80205 Gm25745-201ENSMUST00000174945 133 ntBASIC13.53□□□□□ -0.24
Otx1P80205 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Otx1P80205 Gm27867-201ENSMUST00000184778 125 ntBASIC13.53□□□□□ -0.24
Otx1P80205 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.53□□□□□ -0.24
Otx1P80205 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.53□□□□□ -0.24
Otx1P80205 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Otx1P80205 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Otx1P80205 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otx1P80205 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.53□□□□□ -0.24
Otx1P80205 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otx1P80205 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otx1P80205 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Otx1P80205 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otx1P80205 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Otx1P80205 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otx1P80205 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.52□□□□□ -0.25
Otx1P80205 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.52□□□□□ -0.25
Otx1P80205 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.52□□□□□ -0.25
Otx1P80205 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.52□□□□□ -0.25
Otx1P80205 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Otx1P80205 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.52□□□□□ -0.25
Otx1P80205 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Otx1P80205 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Otx1P80205 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.52□□□□□ -0.25
Otx1P80205 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.52□□□□□ -0.25
Otx1P80205 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otx1P80205 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms