Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.13□□□□□ -0.47
Vamp3P63024 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vamp3P63024 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vamp3P63024 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vamp3P63024 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vamp3P63024 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vamp3P63024 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vamp3P63024 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.12□□□□□ -0.47
Vamp3P63024 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Vamp3P63024 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vamp3P63024 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vamp3P63024 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.12□□□□□ -0.47
Vamp3P63024 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Vamp3P63024 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vamp3P63024 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.11□□□□□ -0.47
Vamp3P63024 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.11□□□□□ -0.47
Vamp3P63024 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.11□□□□□ -0.47
Vamp3P63024 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.11□□□□□ -0.47
Vamp3P63024 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vamp3P63024 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vamp3P63024 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.11□□□□□ -0.47
Vamp3P63024 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vamp3P63024 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Vamp3P63024 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vamp3P63024 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.11□□□□□ -0.47
Vamp3P63024 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vamp3P63024 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vamp3P63024 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vamp3P63024 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vamp3P63024 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vamp3P63024 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vamp3P63024 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vamp3P63024 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Vamp3P63024 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vamp3P63024 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vamp3P63024 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vamp3P63024 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vamp3P63024 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms