Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.2■□□□□ 0.98
Nphp4P59240 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nphp4P59240 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Nphp4P59240 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nphp4P59240 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nphp4P59240 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nphp4P59240 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Nphp4P59240 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nphp4P59240 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Nphp4P59240 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Nphp4P59240 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC21.2■□□□□ 0.98
Nphp4P59240 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC21.2■□□□□ 0.98
Nphp4P59240 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC21.2■□□□□ 0.98
Nphp4P59240 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nphp4P59240 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Nphp4P59240 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.19■□□□□ 0.98
Nphp4P59240 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Nphp4P59240 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.19■□□□□ 0.98
Nphp4P59240 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC21.19■□□□□ 0.98
Nphp4P59240 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC21.19■□□□□ 0.98
Nphp4P59240 Gm2272-201ENSMUST00000194903 582 ntBASIC21.19■□□□□ 0.98
Nphp4P59240 Gm7556-201ENSMUST00000201178 1084 ntBASIC21.19■□□□□ 0.98
Nphp4P59240 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC21.19■□□□□ 0.98
Nphp4P59240 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21.19■□□□□ 0.98
Nphp4P59240 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nphp4P59240 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nphp4P59240 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Nphp4P59240 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Nphp4P59240 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Nphp4P59240 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Nphp4P59240 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC21.18■□□□□ 0.98
Nphp4P59240 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nphp4P59240 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nphp4P59240 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nphp4P59240 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nphp4P59240 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nphp4P59240 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nphp4P59240 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nphp4P59240 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Nphp4P59240 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC21.17■□□□□ 0.98
Nphp4P59240 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC21.17■□□□□ 0.98
Nphp4P59240 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nphp4P59240 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Nphp4P59240 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC21.16■□□□□ 0.98
Nphp4P59240 Gm13365-201ENSMUST00000121188 973 ntBASIC21.16■□□□□ 0.98
Nphp4P59240 Gm5628-201ENSMUST00000222318 1049 ntBASIC21.16■□□□□ 0.98
Nphp4P59240 CT009510.1-201ENSMUST00000227972 270 ntBASIC21.16■□□□□ 0.98
Nphp4P59240 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nphp4P59240 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nphp4P59240 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Nphp4P59240 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC21.15■□□□□ 0.98
Nphp4P59240 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC21.15■□□□□ 0.98
Nphp4P59240 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC21.15■□□□□ 0.98
Nphp4P59240 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nphp4P59240 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nphp4P59240 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Nphp4P59240 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Nphp4P59240 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nphp4P59240 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nphp4P59240 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nphp4P59240 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nphp4P59240 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nphp4P59240 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nphp4P59240 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Nphp4P59240 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nphp4P59240 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Nphp4P59240 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms