Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps33bP59016 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps33bP59016 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps33bP59016 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Vps33bP59016 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.76■□□□□ 0.75
Vps33bP59016 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Gm14719-201ENSMUST00000121891 340 ntBASIC19.76■□□□□ 0.75
Vps33bP59016 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Gm28630-201ENSMUST00000187806 498 ntBASIC19.76■□□□□ 0.75
Vps33bP59016 Gm18049-201ENSMUST00000208909 581 ntBASIC19.76■□□□□ 0.75
Vps33bP59016 Gm9063-201ENSMUST00000223299 582 ntBASIC19.76■□□□□ 0.75
Vps33bP59016 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vps33bP59016 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.76■□□□□ 0.75
Vps33bP59016 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps33bP59016 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps33bP59016 Gm8410-201ENSMUST00000117225 605 ntBASIC19.75■□□□□ 0.75
Vps33bP59016 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps33bP59016 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.75■□□□□ 0.75
Vps33bP59016 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.75■□□□□ 0.75
Vps33bP59016 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps33bP59016 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Vps33bP59016 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps33bP59016 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps33bP59016 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Gm14767-201ENSMUST00000121559 586 ntBASIC19.74■□□□□ 0.75
Vps33bP59016 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vps33bP59016 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Vps33bP59016 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Vps33bP59016 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps33bP59016 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vps33bP59016 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Vps33bP59016 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Vps33bP59016 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Vps33bP59016 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps33bP59016 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps33bP59016 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps33bP59016 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps33bP59016 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Vps33bP59016 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Gm13015-201ENSMUST00000118674 204 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps33bP59016 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.72■□□□□ 0.75
Vps33bP59016 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Gm27680-201ENSMUST00000184192 160 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Gm28631-201ENSMUST00000190740 334 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Gm7653-201ENSMUST00000214567 508 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.72■□□□□ 0.75
Vps33bP59016 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps33bP59016 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.72■□□□□ 0.75
Vps33bP59016 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps33bP59016 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms