Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Rps4l-201ENSMUST00000071745 943 ntBASIC14.09□□□□□ -0.15
Cldn18P56857 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cldn18P56857 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn18P56857 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 App-207ENSMUST00000227737 2827 ntBASIC14.08□□□□□ -0.16
Cldn18P56857 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cldn18P56857 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Gm11780-201ENSMUST00000136880 516 ntBASIC14.08□□□□□ -0.16
Cldn18P56857 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn18P56857 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Gm27741-201ENSMUST00000185060 237 ntBASIC14.08□□□□□ -0.16
Cldn18P56857 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn18P56857 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn18P56857 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.07□□□□□ -0.16
Cldn18P56857 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cldn18P56857 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldn18P56857 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldn18P56857 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cldn18P56857 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cldn18P56857 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Gm13418-201ENSMUST00000119097 944 ntBASIC14.07□□□□□ -0.16
Cldn18P56857 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldn18P56857 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.07□□□□□ -0.16
Cldn18P56857 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.07□□□□□ -0.16
Cldn18P56857 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.07□□□□□ -0.16
Cldn18P56857 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cldn18P56857 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn18P56857 Prob1-201ENSMUST00000097619 3021 ntBASIC14.07□□□□□ -0.16
Cldn18P56857 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.06□□□□□ -0.16
Cldn18P56857 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms