Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab4aP56371 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.46□□□□□ -0.41
Rab4aP56371 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rab4aP56371 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rab4aP56371 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab4aP56371 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab4aP56371 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rab4aP56371 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab4aP56371 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab4aP56371 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rab4aP56371 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Rab4aP56371 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.45□□□□□ -0.42
Rab4aP56371 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.45□□□□□ -0.42
Rab4aP56371 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.45□□□□□ -0.42
Rab4aP56371 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Zfp783-201ENSMUST00000095946 670 ntBASIC12.45□□□□□ -0.42
Rab4aP56371 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rab4aP56371 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rab4aP56371 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rab4aP56371 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Rab4aP56371 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Rab4aP56371 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rab4aP56371 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab4aP56371 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rab4aP56371 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rab4aP56371 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.44□□□□□ -0.42
Rab4aP56371 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.44□□□□□ -0.42
Rab4aP56371 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.44□□□□□ -0.42
Rab4aP56371 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.44□□□□□ -0.42
Rab4aP56371 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.44□□□□□ -0.42
Rab4aP56371 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Rab4aP56371 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Rab4aP56371 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab4aP56371 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rab4aP56371 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rab4aP56371 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab4aP56371 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab4aP56371 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms