Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 AA543401-201ENSMUST00000164248 1269 ntBASIC19.87■□□□□ 0.77
Msh6P54276 Gm27321-201ENSMUST00000185021 205 ntBASIC19.87■□□□□ 0.77
Msh6P54276 Gm5312-201ENSMUST00000203728 547 ntBASIC19.87■□□□□ 0.77
Msh6P54276 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Msh6P54276 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Msh6P54276 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh6P54276 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh6P54276 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.87■□□□□ 0.77
Msh6P54276 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh6P54276 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh6P54276 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Msh6P54276 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.86■□□□□ 0.77
Msh6P54276 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.86■□□□□ 0.77
Msh6P54276 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.86■□□□□ 0.77
Msh6P54276 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Msh6P54276 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh6P54276 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh6P54276 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh6P54276 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh6P54276 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh6P54276 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh6P54276 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.86■□□□□ 0.77
Msh6P54276 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.85■□□□□ 0.77
Msh6P54276 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.85■□□□□ 0.77
Msh6P54276 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Msh6P54276 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.85■□□□□ 0.77
Msh6P54276 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.85■□□□□ 0.77
Msh6P54276 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Msh6P54276 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Msh6P54276 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.85■□□□□ 0.77
Msh6P54276 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh6P54276 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.84■□□□□ 0.77
Msh6P54276 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.84■□□□□ 0.77
Msh6P54276 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Msh6P54276 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Msh6P54276 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Msh6P54276 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.84■□□□□ 0.77
Msh6P54276 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh6P54276 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Msh6P54276 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.83■□□□□ 0.77
Msh6P54276 Gm13365-201ENSMUST00000121188 973 ntBASIC19.83■□□□□ 0.77
Msh6P54276 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.83■□□□□ 0.77
Msh6P54276 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Msh6P54276 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.83■□□□□ 0.77
Msh6P54276 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Msh6P54276 Gm5186-201ENSMUST00000218781 920 ntBASIC19.83■□□□□ 0.77
Msh6P54276 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh6P54276 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Msh6P54276 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh6P54276 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh6P54276 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh6P54276 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh6P54276 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msh6P54276 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Msh6P54276 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Msh6P54276 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh6P54276 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msh6P54276 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms