Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox1P53783 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sox1P53783 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox1P53783 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sox1P53783 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sox1P53783 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox1P53783 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sox1P53783 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sox1P53783 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sox1P53783 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Gm12859-201ENSMUST00000117834 427 ntBASIC16.05■□□□□ 0.16
Sox1P53783 Gm11478-201ENSMUST00000117851 599 ntBASIC16.05■□□□□ 0.16
Sox1P53783 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sox1P53783 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.05■□□□□ 0.16
Sox1P53783 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Sox1P53783 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.05■□□□□ 0.16
Sox1P53783 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.05■□□□□ 0.16
Sox1P53783 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.05■□□□□ 0.16
Sox1P53783 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sox1P53783 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sox1P53783 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sox1P53783 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox1P53783 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.04■□□□□ 0.16
Sox1P53783 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sox1P53783 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Gm16198-201ENSMUST00000118766 670 ntBASIC16.04■□□□□ 0.16
Sox1P53783 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.04■□□□□ 0.16
Sox1P53783 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.04■□□□□ 0.16
Sox1P53783 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.04■□□□□ 0.16
Sox1P53783 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sox1P53783 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Gm6180-201ENSMUST00000065243 498 ntBASIC16.04■□□□□ 0.16
Sox1P53783 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox1P53783 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.03■□□□□ 0.16
Sox1P53783 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox1P53783 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox1P53783 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sox1P53783 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sox1P53783 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Gm18246-201ENSMUST00000221023 728 ntBASIC16.03■□□□□ 0.16
Sox1P53783 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sox1P53783 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox1P53783 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox1P53783 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Sox1P53783 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox1P53783 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox1P53783 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox1P53783 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.02■□□□□ 0.16
Sox1P53783 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox1P53783 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.02■□□□□ 0.15
Sox1P53783 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox1P53783 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox1P53783 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox1P53783 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sox1P53783 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sox1P53783 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sox1P53783 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sox1P53783 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sox1P53783 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sox1P53783 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.01■□□□□ 0.15
Sox1P53783 Gm28631-201ENSMUST00000190740 334 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 216.6 ms