Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.57■□□□□ 0.08
Pdx1P52946 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pdx1P52946 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Gm12497-201ENSMUST00000138778 237 ntBASIC15.57■□□□□ 0.08
Pdx1P52946 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.57■□□□□ 0.08
Pdx1P52946 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.57■□□□□ 0.08
Pdx1P52946 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.57■□□□□ 0.08
Pdx1P52946 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.57■□□□□ 0.08
Pdx1P52946 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdx1P52946 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pdx1P52946 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pdx1P52946 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.56■□□□□ 0.08
Pdx1P52946 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pdx1P52946 Gm27459-201ENSMUST00000184860 107 ntBASIC15.56■□□□□ 0.08
Pdx1P52946 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.56■□□□□ 0.08
Pdx1P52946 Gm43347-201ENSMUST00000200226 580 ntBASIC15.56■□□□□ 0.08
Pdx1P52946 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.56■□□□□ 0.08
Pdx1P52946 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.56■□□□□ 0.08
Pdx1P52946 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.56■□□□□ 0.08
Pdx1P52946 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdx1P52946 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pdx1P52946 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pdx1P52946 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Pdx1P52946 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.55■□□□□ 0.08
Pdx1P52946 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.55■□□□□ 0.08
Pdx1P52946 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Pdx1P52946 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Pdx1P52946 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pdx1P52946 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.55■□□□□ 0.08
Pdx1P52946 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdx1P52946 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pdx1P52946 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pdx1P52946 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pdx1P52946 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdx1P52946 Gm8097-201ENSMUST00000117903 829 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Pdx1P52946 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.54■□□□□ 0.08
Pdx1P52946 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms