Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx3P50481 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx3P50481 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx3P50481 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx3P50481 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx3P50481 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.93■□□□□ 0.14
Lhx3P50481 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx3P50481 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Lhx3P50481 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Lhx3P50481 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.92■□□□□ 0.14
Lhx3P50481 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.92■□□□□ 0.14
Lhx3P50481 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Grk6-207ENSMUST00000225925 2769 ntBASIC15.92■□□□□ 0.14
Lhx3P50481 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.92■□□□□ 0.14
Lhx3P50481 Gm44771-201ENSMUST00000206975 626 ntBASIC15.92■□□□□ 0.14
Lhx3P50481 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.92■□□□□ 0.14
Lhx3P50481 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Lhx3P50481 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Lhx3P50481 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.92■□□□□ 0.14
Lhx3P50481 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Lhx3P50481 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx3P50481 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Lhx3P50481 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.91■□□□□ 0.14
Lhx3P50481 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.91■□□□□ 0.14
Lhx3P50481 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Lhx3P50481 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.91■□□□□ 0.14
Lhx3P50481 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Lhx3P50481 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.91■□□□□ 0.14
Lhx3P50481 Gm13036-201ENSMUST00000117799 748 ntBASIC15.91■□□□□ 0.14
Lhx3P50481 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.91■□□□□ 0.14
Lhx3P50481 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.91■□□□□ 0.14
Lhx3P50481 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lhx3P50481 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Lhx3P50481 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Lhx3P50481 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.91■□□□□ 0.14
Lhx3P50481 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lhx3P50481 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx3P50481 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Lhx3P50481 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Lhx3P50481 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.9■□□□□ 0.14
Lhx3P50481 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.9■□□□□ 0.14
Lhx3P50481 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.9■□□□□ 0.14
Lhx3P50481 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.9■□□□□ 0.14
Lhx3P50481 Gm15590-201ENSMUST00000078419 552 ntBASIC15.9■□□□□ 0.14
Lhx3P50481 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.9■□□□□ 0.14
Lhx3P50481 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.9■□□□□ 0.14
Lhx3P50481 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx3P50481 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Lhx3P50481 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lhx3P50481 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Lhx3P50481 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx3P50481 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.89■□□□□ 0.13
Lhx3P50481 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.89■□□□□ 0.13
Lhx3P50481 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx3P50481 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx3P50481 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx3P50481 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx3P50481 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms