Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.54■□□□□ 0.4
Brca1P48754 Gm7488-201ENSMUST00000117148 684 ntBASIC17.54■□□□□ 0.4
Brca1P48754 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brca1P48754 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Brca1P48754 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.54■□□□□ 0.4
Brca1P48754 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.54■□□□□ 0.4
Brca1P48754 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.53■□□□□ 0.4
Brca1P48754 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Brca1P48754 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brca1P48754 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Brca1P48754 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brca1P48754 Gm2810-201ENSMUST00000118681 990 ntBASIC17.52■□□□□ 0.4
Brca1P48754 Gm17837-201ENSMUST00000186435 985 ntBASIC17.52■□□□□ 0.4
Brca1P48754 Gm29541-201ENSMUST00000191351 678 ntBASIC17.52■□□□□ 0.4
Brca1P48754 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.52■□□□□ 0.4
Brca1P48754 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.52■□□□□ 0.4
Brca1P48754 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brca1P48754 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brca1P48754 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brca1P48754 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Brca1P48754 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.52■□□□□ 0.4
Brca1P48754 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.52■□□□□ 0.4
Brca1P48754 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brca1P48754 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Brca1P48754 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Brca1P48754 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Brca1P48754 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Brca1P48754 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.52■□□□□ 0.39
Brca1P48754 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Brca1P48754 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Brca1P48754 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Gm6973-201ENSMUST00000117080 721 ntBASIC17.51■□□□□ 0.39
Brca1P48754 Gm6415-201ENSMUST00000118488 348 ntBASIC17.51■□□□□ 0.39
Brca1P48754 Gm12490-201ENSMUST00000120255 560 ntBASIC17.51■□□□□ 0.39
Brca1P48754 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.51■□□□□ 0.39
Brca1P48754 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.51■□□□□ 0.39
Brca1P48754 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.51■□□□□ 0.39
Brca1P48754 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.51■□□□□ 0.39
Brca1P48754 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.51■□□□□ 0.39
Brca1P48754 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Brca1P48754 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Brca1P48754 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Brca1P48754 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Brca1P48754 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.5■□□□□ 0.39
Brca1P48754 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.5■□□□□ 0.39
Brca1P48754 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Brca1P48754 Gm14719-201ENSMUST00000121891 340 ntBASIC17.5■□□□□ 0.39
Brca1P48754 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Brca1P48754 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Brca1P48754 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
Brca1P48754 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Brca1P48754 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.49■□□□□ 0.39
Brca1P48754 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Brca1P48754 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Brca1P48754 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.49■□□□□ 0.39
Brca1P48754 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Brca1P48754 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms