Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox2P48432 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.8□□□□□ -0.04
Sox2P48432 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sox2P48432 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Sox2P48432 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.8□□□□□ -0.04
Sox2P48432 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox2P48432 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox2P48432 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox2P48432 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.79□□□□□ -0.04
Sox2P48432 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox2P48432 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Sox2P48432 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox2P48432 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox2P48432 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.79□□□□□ -0.04
Sox2P48432 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sox2P48432 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox2P48432 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox2P48432 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.79□□□□□ -0.04
Sox2P48432 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox2P48432 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.78□□□□□ -0.04
Sox2P48432 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox2P48432 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.78□□□□□ -0.04
Sox2P48432 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.78□□□□□ -0.04
Sox2P48432 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sox2P48432 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox2P48432 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sox2P48432 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.77□□□□□ -0.04
Sox2P48432 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox2P48432 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Sox2P48432 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox2P48432 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox2P48432 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Sox2P48432 Gm16061-201ENSMUST00000122167 857 ntBASIC14.77□□□□□ -0.05
Sox2P48432 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms