Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl11P48298 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccl11P48298 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Gm12260-201ENSMUST00000122447 411 ntBASIC13.3□□□□□ -0.28
Ccl11P48298 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.3□□□□□ -0.28
Ccl11P48298 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.3□□□□□ -0.28
Ccl11P48298 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.3□□□□□ -0.28
Ccl11P48298 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Grk6-207ENSMUST00000225925 2769 ntBASIC13.3□□□□□ -0.28
Ccl11P48298 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl11P48298 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl11P48298 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl11P48298 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ccl11P48298 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl11P48298 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl11P48298 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccl11P48298 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccl11P48298 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccl11P48298 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl11P48298 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl11P48298 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ccl11P48298 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.29□□□□□ -0.28
Ccl11P48298 Gm19164-201ENSMUST00000210667 640 ntBASIC13.29□□□□□ -0.28
Ccl11P48298 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Gm5867-201ENSMUST00000063197 592 ntBASIC13.29□□□□□ -0.28
Ccl11P48298 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccl11P48298 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl11P48298 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl11P48298 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.28□□□□□ -0.28
Ccl11P48298 Gm11779-201ENSMUST00000118541 368 ntBASIC13.28□□□□□ -0.28
Ccl11P48298 Gm15358-201ENSMUST00000119249 520 ntBASIC13.28□□□□□ -0.28
Ccl11P48298 Gm14140-201ENSMUST00000119999 995 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms