Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.3□□□□□ -0.76
Xcl1P47993 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.3□□□□□ -0.76
Xcl1P47993 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.3□□□□□ -0.76
Xcl1P47993 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Xcl1P47993 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Xcl1P47993 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC10.29□□□□□ -0.76
Xcl1P47993 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.29□□□□□ -0.76
Xcl1P47993 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Xcl1P47993 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.29□□□□□ -0.76
Xcl1P47993 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Xcl1P47993 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Xcl1P47993 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.28□□□□□ -0.76
Xcl1P47993 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Xcl1P47993 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC10.27□□□□□ -0.76
Xcl1P47993 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Xcl1P47993 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Gm13401-201ENSMUST00000117074 291 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms