Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.99■□□□□ 0.15
Vps4bP46467 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vps4bP46467 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Gm25016-201ENSMUST00000158399 131 ntBASIC15.99■□□□□ 0.15
Vps4bP46467 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Ank2-226ENSMUST00000189368 339 ntBASIC15.99■□□□□ 0.15
Vps4bP46467 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps4bP46467 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vps4bP46467 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps4bP46467 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps4bP46467 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.98■□□□□ 0.15
Vps4bP46467 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vps4bP46467 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps4bP46467 Gm6257-201ENSMUST00000163864 910 ntBASIC15.98■□□□□ 0.15
Vps4bP46467 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.98■□□□□ 0.15
Vps4bP46467 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.98■□□□□ 0.15
Vps4bP46467 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Vps4bP46467 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps4bP46467 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps4bP46467 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.97■□□□□ 0.15
Vps4bP46467 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps4bP46467 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps4bP46467 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Vps4bP46467 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps4bP46467 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4bP46467 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vps4bP46467 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps4bP46467 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.96■□□□□ 0.15
Vps4bP46467 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vps4bP46467 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vps4bP46467 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps4bP46467 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4bP46467 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
Vps4bP46467 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms