Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.9□□□□□ -0.34
Timp3P39876 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Timp3P39876 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.9□□□□□ -0.34
Timp3P39876 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.9□□□□□ -0.34
Timp3P39876 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Timp3P39876 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.9□□□□□ -0.34
Timp3P39876 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.9□□□□□ -0.34
Timp3P39876 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Timp3P39876 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Timp3P39876 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Timp3P39876 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Timp3P39876 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Timp3P39876 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Timp3P39876 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.89□□□□□ -0.35
Timp3P39876 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Timp3P39876 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.89□□□□□ -0.35
Timp3P39876 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Timp3P39876 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.89□□□□□ -0.35
Timp3P39876 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.89□□□□□ -0.35
Timp3P39876 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.89□□□□□ -0.35
Timp3P39876 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.89□□□□□ -0.35
Timp3P39876 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.89□□□□□ -0.35
Timp3P39876 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Timp3P39876 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.88□□□□□ -0.35
Timp3P39876 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.88□□□□□ -0.35
Timp3P39876 Gm7862-201ENSMUST00000121461 292 ntBASIC12.88□□□□□ -0.35
Timp3P39876 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Gm36967-201ENSMUST00000193814 266 ntBASIC12.88□□□□□ -0.35
Timp3P39876 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Timp3P39876 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Timp3P39876 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Timp3P39876 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms