Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Fen1P39749 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Fen1P39749 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.89■□□□□ 0.13
Fen1P39749 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.89■□□□□ 0.13
Fen1P39749 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.89■□□□□ 0.13
Fen1P39749 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.89■□□□□ 0.13
Fen1P39749 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Fen1P39749 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.89■□□□□ 0.13
Fen1P39749 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Gm27463-201ENSMUST00000183569 57 ntBASIC15.89■□□□□ 0.13
Fen1P39749 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Odf3b-204ENSMUST00000227834 930 ntBASIC15.89■□□□□ 0.13
Fen1P39749 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Fen1P39749 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.89■□□□□ 0.13
Fen1P39749 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.88■□□□□ 0.13
Fen1P39749 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Fen1P39749 Gm11539-201ENSMUST00000119837 557 ntBASIC15.88■□□□□ 0.13
Fen1P39749 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Fen1P39749 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.88■□□□□ 0.13
Fen1P39749 Mir5122-201ENSMUST00000175004 89 ntBASIC15.88■□□□□ 0.13
Fen1P39749 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.88■□□□□ 0.13
Fen1P39749 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.88■□□□□ 0.13
Fen1P39749 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Fen1P39749 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fen1P39749 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Fen1P39749 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Fen1P39749 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Gm44450-201ENSMUST00000199528 114 ntBASIC15.87■□□□□ 0.13
Fen1P39749 Gm18421-201ENSMUST00000204122 625 ntBASIC15.87■□□□□ 0.13
Fen1P39749 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Fen1P39749 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Fen1P39749 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Fen1P39749 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Asic1-205ENSMUST00000228185 1818 ntBASIC15.87■□□□□ 0.13
Fen1P39749 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fen1P39749 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Fen1P39749 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Fen1P39749 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fen1P39749 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Fen1P39749 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms