Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk2P38575 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk2P38575 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Upk2P38575 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.82□□□□□ -0.2
Upk2P38575 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.82□□□□□ -0.2
Upk2P38575 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.82□□□□□ -0.2
Upk2P38575 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.82□□□□□ -0.2
Upk2P38575 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.82□□□□□ -0.2
Upk2P38575 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Upk2P38575 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Upk2P38575 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk2P38575 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.81□□□□□ -0.2
Upk2P38575 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Upk2P38575 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk2P38575 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.81□□□□□ -0.2
Upk2P38575 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.81□□□□□ -0.2
Upk2P38575 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Upk2P38575 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.81□□□□□ -0.2
Upk2P38575 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk2P38575 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.81□□□□□ -0.2
Upk2P38575 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.81□□□□□ -0.2
Upk2P38575 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Upk2P38575 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Upk2P38575 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk2P38575 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Upk2P38575 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Gm25745-201ENSMUST00000174945 133 ntBASIC13.8□□□□□ -0.2
Upk2P38575 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.8□□□□□ -0.2
Upk2P38575 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.8□□□□□ -0.2
Upk2P38575 Asic1-205ENSMUST00000228185 1818 ntBASIC13.8□□□□□ -0.2
Upk2P38575 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk2P38575 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk2P38575 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.79□□□□□ -0.2
Upk2P38575 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.79□□□□□ -0.2
Upk2P38575 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.79□□□□□ -0.2
Upk2P38575 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Upk2P38575 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Upk2P38575 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.79□□□□□ -0.2
Upk2P38575 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Upk2P38575 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Upk2P38575 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk2P38575 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms