Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Col8a2P25318 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col8a2P25318 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Col8a2P25318 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col8a2P25318 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.14□□□□□ -0.31
Col8a2P25318 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col8a2P25318 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col8a2P25318 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col8a2P25318 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm7230-201ENSMUST00000173026 815 ntBASIC13.14□□□□□ -0.31
Col8a2P25318 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.14□□□□□ -0.31
Col8a2P25318 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col8a2P25318 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col8a2P25318 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col8a2P25318 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.13□□□□□ -0.31
Col8a2P25318 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.13□□□□□ -0.31
Col8a2P25318 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col8a2P25318 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.13□□□□□ -0.31
Col8a2P25318 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.13□□□□□ -0.31
Col8a2P25318 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.13□□□□□ -0.31
Col8a2P25318 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.13□□□□□ -0.31
Col8a2P25318 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Gm27628-201ENSMUST00000184911 107 ntBASIC13.13□□□□□ -0.31
Col8a2P25318 Gm6550-201ENSMUST00000187574 993 ntBASIC13.13□□□□□ -0.31
Col8a2P25318 Gm18195-201ENSMUST00000207604 706 ntBASIC13.13□□□□□ -0.31
Col8a2P25318 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col8a2P25318 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col8a2P25318 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Col8a2P25318 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col8a2P25318 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.13□□□□□ -0.31
Col8a2P25318 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col8a2P25318 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.12□□□□□ -0.31
Col8a2P25318 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Col8a2P25318 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.12□□□□□ -0.31
Col8a2P25318 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.12□□□□□ -0.31
Col8a2P25318 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Gm1401-201ENSMUST00000122048 772 ntBASIC13.12□□□□□ -0.31
Col8a2P25318 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Mir5126-201ENSMUST00000175513 77 ntBASIC13.12□□□□□ -0.31
Col8a2P25318 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col8a2P25318 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.12□□□□□ -0.31
Col8a2P25318 Gm18206-201ENSMUST00000207027 926 ntBASIC13.12□□□□□ -0.31
Col8a2P25318 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.12□□□□□ -0.31
Col8a2P25318 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col8a2P25318 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col8a2P25318 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col8a2P25318 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms