Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfrsf1aP25118 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Tnfrsf1aP25118 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
Tnfrsf1aP25118 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfrsf1aP25118 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfrsf1aP25118 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tnfrsf1aP25118 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf1aP25118 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf1aP25118 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf1aP25118 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf1aP25118 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf1aP25118 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Gm11950-201ENSMUST00000121615 838 ntBASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf1aP25118 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Gm45328-201ENSMUST00000210942 917 ntBASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf1aP25118 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms