Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 BC037039-201ENSMUST00000192003 2205 ntBASIC14.39□□□□□ -0.11
Cbx3P23198 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cbx3P23198 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.39□□□□□ -0.11
Cbx3P23198 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cbx3P23198 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cbx3P23198 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx3P23198 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cbx3P23198 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cbx3P23198 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.38□□□□□ -0.11
Cbx3P23198 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.38□□□□□ -0.11
Cbx3P23198 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.38□□□□□ -0.11
Cbx3P23198 Gm4968-201ENSMUST00000071458 858 ntBASIC14.38□□□□□ -0.11
Cbx3P23198 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.38□□□□□ -0.11
Cbx3P23198 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cbx3P23198 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.37□□□□□ -0.11
Cbx3P23198 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.37□□□□□ -0.11
Cbx3P23198 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cbx3P23198 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Gm2559-201ENSMUST00000201323 363 ntBASIC14.37□□□□□ -0.11
Cbx3P23198 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.37□□□□□ -0.11
Cbx3P23198 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Cbx3P23198 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cbx3P23198 Gm10602-201ENSMUST00000098239 609 ntBASIC14.37□□□□□ -0.11
Cbx3P23198 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cbx3P23198 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cbx3P23198 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.36□□□□□ -0.11
Cbx3P23198 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.36□□□□□ -0.11
Cbx3P23198 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cbx3P23198 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Cbx3P23198 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Gm12134-201ENSMUST00000122109 520 ntBASIC14.36□□□□□ -0.11
Cbx3P23198 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.36□□□□□ -0.11
Cbx3P23198 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cbx3P23198 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms