Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BdnfP21237 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.11■□□□□ 0.01
BdnfP21237 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.11■□□□□ 0.01
BdnfP21237 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.11■□□□□ 0.01
BdnfP21237 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BdnfP21237 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BdnfP21237 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BdnfP21237 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BdnfP21237 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
BdnfP21237 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BdnfP21237 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BdnfP21237 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
BdnfP21237 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
BdnfP21237 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
BdnfP21237 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BdnfP21237 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.1■□□□□ 0.01
BdnfP21237 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.1■□□□□ 0.01
BdnfP21237 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.1■□□□□ 0.01
BdnfP21237 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.1■□□□□ 0.01
BdnfP21237 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
BdnfP21237 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BdnfP21237 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BdnfP21237 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.09■□□□□ 0.01
BdnfP21237 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
BdnfP21237 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
BdnfP21237 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
BdnfP21237 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.09■□□□□ 0.01
BdnfP21237 Gm18101-201ENSMUST00000215769 548 ntBASIC15.09■□□□□ 0.01
BdnfP21237 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
BdnfP21237 Gm9987-201ENSMUST00000069768 567 ntBASIC15.09■□□□□ 0.01
BdnfP21237 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
BdnfP21237 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
BdnfP21237 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
BdnfP21237 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BdnfP21237 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.08■□□□□ 0.01
BdnfP21237 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
BdnfP21237 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
BdnfP21237 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
BdnfP21237 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
BdnfP21237 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms