Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf9P20334 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Gm15165-201ENSMUST00000118140 502 ntBASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Gm12260-201ENSMUST00000122447 411 ntBASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Gm7063-201ENSMUST00000186840 981 ntBASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf9P20334 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Gm15467-201ENSMUST00000120582 445 ntBASIC12.84□□□□□ -0.35
Tnfrsf9P20334 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.84□□□□□ -0.35
Tnfrsf9P20334 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf9P20334 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.83□□□□□ -0.35
Tnfrsf9P20334 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf9P20334 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.83□□□□□ -0.35
Tnfrsf9P20334 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf9P20334 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf9P20334 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms