Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.32■□□□□ 0.84
Hoxc9P09633 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc9P09633 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc9P09633 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Hoxc9P09633 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc9P09633 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc9P09633 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Hoxc9P09633 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hoxc9P09633 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.3■□□□□ 0.84
Hoxc9P09633 Gm14722-201ENSMUST00000118943 689 ntBASIC20.3■□□□□ 0.84
Hoxc9P09633 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.3■□□□□ 0.84
Hoxc9P09633 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.3■□□□□ 0.84
Hoxc9P09633 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.3■□□□□ 0.84
Hoxc9P09633 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc9P09633 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Gm14057-201ENSMUST00000120631 482 ntBASIC20.29■□□□□ 0.84
Hoxc9P09633 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Rprl2-201ENSMUST00000157150 290 ntBASIC20.29■□□□□ 0.84
Hoxc9P09633 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 AA543401-201ENSMUST00000164248 1269 ntBASIC20.29■□□□□ 0.84
Hoxc9P09633 Gm10499-201ENSMUST00000174094 934 ntBASIC20.29■□□□□ 0.84
Hoxc9P09633 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hoxc9P09633 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxc9P09633 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxc9P09633 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxc9P09633 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.29■□□□□ 0.84
Hoxc9P09633 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.29■□□□□ 0.84
Hoxc9P09633 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc9P09633 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.28■□□□□ 0.84
Hoxc9P09633 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.28■□□□□ 0.84
Hoxc9P09633 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Hoxc9P09633 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Hoxc9P09633 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Hoxc9P09633 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.28■□□□□ 0.84
Hoxc9P09633 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.28■□□□□ 0.84
Hoxc9P09633 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc9P09633 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hoxc9P09633 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc9P09633 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms