Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04212 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04212 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.81□□□□□ -0.36
P04212 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P04212 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.81□□□□□ -0.36
P04212 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
P04212 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P04212 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
P04212 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04212 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.81□□□□□ -0.36
P04212 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04212 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04212 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04212 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.8□□□□□ -0.36
P04212 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P04212 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04212 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.8□□□□□ -0.36
P04212 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P04212 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.8□□□□□ -0.36
P04212 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.8□□□□□ -0.36
P04212 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
P04212 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04212 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04212 App-207ENSMUST00000227737 2827 ntBASIC12.8□□□□□ -0.36
P04212 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.8□□□□□ -0.36
P04212 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04212 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04212 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
P04212 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.79□□□□□ -0.36
P04212 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.79□□□□□ -0.36
P04212 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P04212 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.79□□□□□ -0.36
P04212 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.79□□□□□ -0.36
P04212 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04212 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P04212 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04212 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
P04212 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
P04212 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.78□□□□□ -0.36
P04212 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04212 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04212 Gm10013-201ENSMUST00000106074 672 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms