Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.2■□□□□ 0.66
Col4a1P02463 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.2■□□□□ 0.66
Col4a1P02463 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.2■□□□□ 0.66
Col4a1P02463 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Col4a1P02463 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col4a1P02463 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col4a1P02463 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.2■□□□□ 0.66
Col4a1P02463 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.2■□□□□ 0.66
Col4a1P02463 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.2■□□□□ 0.66
Col4a1P02463 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a1P02463 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Col4a1P02463 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.19■□□□□ 0.66
Col4a1P02463 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.19■□□□□ 0.66
Col4a1P02463 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Col4a1P02463 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.19■□□□□ 0.66
Col4a1P02463 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.19■□□□□ 0.66
Col4a1P02463 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col4a1P02463 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a1P02463 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col4a1P02463 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Mir449b-201ENSMUST00000104833 80 ntBASIC19.18■□□□□ 0.66
Col4a1P02463 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.18■□□□□ 0.66
Col4a1P02463 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.18■□□□□ 0.66
Col4a1P02463 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.18■□□□□ 0.66
Col4a1P02463 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.18■□□□□ 0.66
Col4a1P02463 Gm10154-201ENSMUST00000084445 354 ntBASIC19.18■□□□□ 0.66
Col4a1P02463 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col4a1P02463 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a1P02463 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.17■□□□□ 0.66
Col4a1P02463 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col4a1P02463 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.17■□□□□ 0.66
Col4a1P02463 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.17■□□□□ 0.66
Col4a1P02463 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Gm13223-201ENSMUST00000118609 747 ntBASIC19.17■□□□□ 0.66
Col4a1P02463 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.17■□□□□ 0.66
Col4a1P02463 Gm14722-201ENSMUST00000118943 689 ntBASIC19.17■□□□□ 0.66
Col4a1P02463 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.17■□□□□ 0.66
Col4a1P02463 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.17■□□□□ 0.66
Col4a1P02463 Gm27622-201ENSMUST00000183779 60 ntBASIC19.17■□□□□ 0.66
Col4a1P02463 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.17■□□□□ 0.66
Col4a1P02463 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col4a1P02463 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a1P02463 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.16■□□□□ 0.66
Col4a1P02463 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.16■□□□□ 0.66
Col4a1P02463 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.16■□□□□ 0.66
Col4a1P02463 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.16■□□□□ 0.66
Col4a1P02463 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col4a1P02463 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a1P02463 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms