Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Hbb-b1P02088 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hbb-b1P02088 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hbb-b1P02088 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hbb-b1P02088 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.14□□□□□ -0.63
Hbb-b1P02088 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 AC140930.3-201ENSMUST00000222935 274 ntBASIC11.14□□□□□ -0.63
Hbb-b1P02088 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hbb-b1P02088 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.13□□□□□ -0.63
Hbb-b1P02088 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.13□□□□□ -0.63
Hbb-b1P02088 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.13□□□□□ -0.63
Hbb-b1P02088 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hbb-b1P02088 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.12□□□□□ -0.63
Hbb-b1P02088 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.12□□□□□ -0.63
Hbb-b1P02088 Gm27000-201ENSMUST00000182943 842 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms