Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
P01852 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P01852 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
P01852 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
P01852 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.39□□□□□ -0.11
P01852 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.39□□□□□ -0.11
P01852 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.39□□□□□ -0.11
P01852 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.39□□□□□ -0.11
P01852 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
P01852 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
P01852 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
P01852 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P01852 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.39□□□□□ -0.11
P01852 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
P01852 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
P01852 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.38□□□□□ -0.11
P01852 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
P01852 Gm12497-201ENSMUST00000138778 237 ntBASIC14.38□□□□□ -0.11
P01852 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.38□□□□□ -0.11
P01852 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.38□□□□□ -0.11
P01852 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
P01852 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
P01852 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
P01852 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.37□□□□□ -0.11
P01852 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
P01852 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
P01852 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
P01852 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.37□□□□□ -0.11
P01852 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.37□□□□□ -0.11
P01852 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.37□□□□□ -0.11
P01852 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P01852 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P01852 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
P01852 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P01852 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
P01852 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P01852 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P01852 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms