Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.95■□□□□ 0.3
Vti1aO89116 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Vti1aO89116 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.95■□□□□ 0.3
Vti1aO89116 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vti1aO89116 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vti1aO89116 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.95■□□□□ 0.3
Vti1aO89116 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vti1aO89116 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.94■□□□□ 0.3
Vti1aO89116 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Gm6736-201ENSMUST00000166583 948 ntBASIC16.94■□□□□ 0.3
Vti1aO89116 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.94■□□□□ 0.3
Vti1aO89116 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vti1aO89116 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vti1aO89116 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Gm11780-201ENSMUST00000136880 516 ntBASIC16.93■□□□□ 0.3
Vti1aO89116 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.93■□□□□ 0.3
Vti1aO89116 Gm27702-201ENSMUST00000184512 56 ntBASIC16.93■□□□□ 0.3
Vti1aO89116 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.93■□□□□ 0.3
Vti1aO89116 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.93■□□□□ 0.3
Vti1aO89116 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vti1aO89116 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vti1aO89116 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.92■□□□□ 0.3
Vti1aO89116 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vti1aO89116 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vti1aO89116 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.92■□□□□ 0.3
Vti1aO89116 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vti1aO89116 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms