Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CcnkO88874 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CcnkO88874 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CcnkO88874 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CcnkO88874 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
CcnkO88874 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.03□□□□□ -0.16
CcnkO88874 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.03□□□□□ -0.16
CcnkO88874 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.03□□□□□ -0.16
CcnkO88874 Gm18115-201ENSMUST00000221209 621 ntBASIC14.03□□□□□ -0.16
CcnkO88874 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CcnkO88874 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CcnkO88874 Actl10-202ENSMUST00000226583 1501 ntBASIC14.03□□□□□ -0.16
CcnkO88874 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.03□□□□□ -0.16
CcnkO88874 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CcnkO88874 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcnkO88874 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.03□□□□□ -0.16
CcnkO88874 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CcnkO88874 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CcnkO88874 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.02□□□□□ -0.16
CcnkO88874 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.02□□□□□ -0.16
CcnkO88874 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcnkO88874 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.02□□□□□ -0.17
CcnkO88874 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.02□□□□□ -0.17
CcnkO88874 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CcnkO88874 Gm43799-201ENSMUST00000201845 579 ntBASIC14.02□□□□□ -0.17
CcnkO88874 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.02□□□□□ -0.17
CcnkO88874 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CcnkO88874 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CcnkO88874 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CcnkO88874 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CcnkO88874 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CcnkO88874 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
CcnkO88874 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CcnkO88874 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CcnkO88874 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CcnkO88874 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcnkO88874 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CcnkO88874 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.01□□□□□ -0.17
CcnkO88874 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
CcnkO88874 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.01□□□□□ -0.17
CcnkO88874 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Mir5130-201ENSMUST00000175160 84 ntBASIC14.01□□□□□ -0.17
CcnkO88874 Gm45058-201ENSMUST00000205810 766 ntBASIC14.01□□□□□ -0.17
CcnkO88874 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.01□□□□□ -0.17
CcnkO88874 Gm7213-201ENSMUST00000215977 950 ntBASIC14.01□□□□□ -0.17
CcnkO88874 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.01□□□□□ -0.17
CcnkO88874 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
CcnkO88874 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CcnkO88874 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms