Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.41■□□□□ 0.38
IkbkbO88351 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.41■□□□□ 0.38
IkbkbO88351 Gm28659-201ENSMUST00000188013 759 ntBASIC17.41■□□□□ 0.38
IkbkbO88351 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
IkbkbO88351 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.4■□□□□ 0.38
IkbkbO88351 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.4■□□□□ 0.38
IkbkbO88351 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IkbkbO88351 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.4■□□□□ 0.38
IkbkbO88351 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.4■□□□□ 0.38
IkbkbO88351 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.4■□□□□ 0.38
IkbkbO88351 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
IkbkbO88351 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.4■□□□□ 0.38
IkbkbO88351 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IkbkbO88351 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IkbkbO88351 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
IkbkbO88351 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
IkbkbO88351 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IkbkbO88351 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
IkbkbO88351 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
IkbkbO88351 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
IkbkbO88351 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.39■□□□□ 0.37
IkbkbO88351 Mir8098-201ENSMUST00000184011 137 ntBASIC17.39■□□□□ 0.37
IkbkbO88351 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.39■□□□□ 0.37
IkbkbO88351 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
IkbkbO88351 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IkbkbO88351 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
IkbkbO88351 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IkbkbO88351 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IkbkbO88351 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.38■□□□□ 0.37
IkbkbO88351 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.38■□□□□ 0.37
IkbkbO88351 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.38■□□□□ 0.37
IkbkbO88351 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.38■□□□□ 0.37
IkbkbO88351 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IkbkbO88351 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
IkbkbO88351 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IkbkbO88351 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.37■□□□□ 0.37
IkbkbO88351 Gm11452-201ENSMUST00000122376 690 ntBASIC17.37■□□□□ 0.37
IkbkbO88351 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.37■□□□□ 0.37
IkbkbO88351 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IkbkbO88351 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IkbkbO88351 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms