Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rdh5O55240 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Rdh5O55240 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.91□□□□□ -0.02
Rdh5O55240 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.91□□□□□ -0.02
Rdh5O55240 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.91□□□□□ -0.02
Rdh5O55240 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rdh5O55240 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rdh5O55240 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.9□□□□□ -0.02
Rdh5O55240 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Rdh5O55240 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rdh5O55240 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.9□□□□□ -0.02
Rdh5O55240 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.9□□□□□ -0.02
Rdh5O55240 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.9□□□□□ -0.02
Rdh5O55240 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rdh5O55240 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Rdh5O55240 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Rdh5O55240 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rdh5O55240 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rdh5O55240 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.89□□□□□ -0.03
Rdh5O55240 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rdh5O55240 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rdh5O55240 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rdh5O55240 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.89□□□□□ -0.03
Rdh5O55240 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.89□□□□□ -0.03
Rdh5O55240 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.89□□□□□ -0.03
Rdh5O55240 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.89□□□□□ -0.03
Rdh5O55240 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rdh5O55240 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Rdh5O55240 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rdh5O55240 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rdh5O55240 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.88□□□□□ -0.03
Rdh5O55240 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rdh5O55240 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rdh5O55240 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.88□□□□□ -0.03
Rdh5O55240 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms