Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Pja1O55176 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pja1O55176 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pja1O55176 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pja1O55176 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pja1O55176 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
Pja1O55176 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pja1O55176 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Gm6433-201ENSMUST00000118634 875 ntBASIC16.62■□□□□ 0.25
Pja1O55176 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Gm9987-201ENSMUST00000069768 567 ntBASIC16.62■□□□□ 0.25
Pja1O55176 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pja1O55176 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pja1O55176 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.61■□□□□ 0.25
Pja1O55176 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.61■□□□□ 0.25
Pja1O55176 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pja1O55176 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.61■□□□□ 0.25
Pja1O55176 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pja1O55176 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.61■□□□□ 0.25
Pja1O55176 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.6■□□□□ 0.25
Pja1O55176 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.6■□□□□ 0.25
Pja1O55176 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pja1O55176 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pja1O55176 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.6■□□□□ 0.25
Pja1O55176 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.6■□□□□ 0.25
Pja1O55176 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.6■□□□□ 0.25
Pja1O55176 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.6■□□□□ 0.25
Pja1O55176 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pja1O55176 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pja1O55176 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.6■□□□□ 0.25
Pja1O55176 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pja1O55176 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pja1O55176 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.6■□□□□ 0.25
Pja1O55176 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pja1O55176 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.59■□□□□ 0.25
Pja1O55176 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pja1O55176 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pja1O55176 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pja1O55176 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.59■□□□□ 0.25
Pja1O55176 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pja1O55176 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms