Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl13O55038 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl13O55038 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Grk6-207ENSMUST00000225925 2769 ntBASIC13.28□□□□□ -0.28
Cxcl13O55038 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.28□□□□□ -0.28
Cxcl13O55038 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Gm18489-201ENSMUST00000172565 551 ntBASIC13.28□□□□□ -0.28
Cxcl13O55038 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.28□□□□□ -0.28
Cxcl13O55038 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.28□□□□□ -0.28
Cxcl13O55038 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cxcl13O55038 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.28□□□□□ -0.28
Cxcl13O55038 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl13O55038 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.27□□□□□ -0.28
Cxcl13O55038 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.27□□□□□ -0.28
Cxcl13O55038 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl13O55038 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Gm4899-201ENSMUST00000178708 719 ntBASIC13.27□□□□□ -0.29
Cxcl13O55038 Gm9682-201ENSMUST00000197505 556 ntBASIC13.27□□□□□ -0.29
Cxcl13O55038 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl13O55038 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl13O55038 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl13O55038 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.26□□□□□ -0.29
Cxcl13O55038 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms