Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Prom1O54990 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.3■□□□□ 0.36
Prom1O54990 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.3■□□□□ 0.36
Prom1O54990 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.3■□□□□ 0.36
Prom1O54990 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.3■□□□□ 0.36
Prom1O54990 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.3■□□□□ 0.36
Prom1O54990 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prom1O54990 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.29■□□□□ 0.36
Prom1O54990 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Prom1O54990 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.29■□□□□ 0.36
Prom1O54990 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.29■□□□□ 0.36
Prom1O54990 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Prom1O54990 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prom1O54990 Gm13365-201ENSMUST00000121188 973 ntBASIC17.29■□□□□ 0.36
Prom1O54990 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Prom1O54990 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.29■□□□□ 0.36
Prom1O54990 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.29■□□□□ 0.36
Prom1O54990 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.29■□□□□ 0.36
Prom1O54990 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.29■□□□□ 0.36
Prom1O54990 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.29■□□□□ 0.36
Prom1O54990 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.29■□□□□ 0.36
Prom1O54990 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prom1O54990 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prom1O54990 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prom1O54990 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.28■□□□□ 0.36
Prom1O54990 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prom1O54990 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.28■□□□□ 0.36
Prom1O54990 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Gm18246-201ENSMUST00000221023 728 ntBASIC17.28■□□□□ 0.36
Prom1O54990 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.28■□□□□ 0.36
Prom1O54990 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prom1O54990 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prom1O54990 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.27■□□□□ 0.36
Prom1O54990 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.27■□□□□ 0.36
Prom1O54990 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prom1O54990 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.27■□□□□ 0.36
Prom1O54990 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.27■□□□□ 0.36
Prom1O54990 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.27■□□□□ 0.36
Prom1O54990 Gm20553-201ENSMUST00000204205 844 ntBASIC17.27■□□□□ 0.36
Prom1O54990 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Prom1O54990 Gm8396-201ENSMUST00000057361 823 ntBASIC17.27■□□□□ 0.36
Prom1O54990 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Prom1O54990 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.27■□□□□ 0.36
Prom1O54990 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prom1O54990 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prom1O54990 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prom1O54990 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prom1O54990 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.27■□□□□ 0.35
Prom1O54990 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.27■□□□□ 0.35
Prom1O54990 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Prom1O54990 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prom1O54990 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms