Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn5O54942 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn5O54942 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn5O54942 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn5O54942 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cldn5O54942 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn5O54942 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cldn5O54942 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn5O54942 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Cldn5O54942 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn5O54942 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cldn5O54942 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cldn5O54942 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cldn5O54942 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cldn5O54942 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.32■□□□□ 0.2
Cldn5O54942 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn5O54942 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn5O54942 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn5O54942 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn5O54942 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.31■□□□□ 0.2
Cldn5O54942 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.31■□□□□ 0.2
Cldn5O54942 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn5O54942 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.3■□□□□ 0.2
Cldn5O54942 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldn5O54942 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.3■□□□□ 0.2
Cldn5O54942 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.3■□□□□ 0.2
Cldn5O54942 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldn5O54942 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn5O54942 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn5O54942 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.3■□□□□ 0.2
Cldn5O54942 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn5O54942 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldn5O54942 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn5O54942 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn5O54942 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn5O54942 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.29■□□□□ 0.2
Cldn5O54942 Psmb5-202ENSMUST00000227257 622 ntBASIC16.29■□□□□ 0.2
Cldn5O54942 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms