Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.73■□□□□ 0.43
Stx1aO35526 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stx1aO35526 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Stx1aO35526 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Stx1aO35526 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Stx1aO35526 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Stx1aO35526 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.72■□□□□ 0.43
Stx1aO35526 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.72■□□□□ 0.43
Stx1aO35526 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.72■□□□□ 0.43
Stx1aO35526 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.72■□□□□ 0.43
Stx1aO35526 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Stx1aO35526 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.72■□□□□ 0.43
Stx1aO35526 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Stx1aO35526 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Stx1aO35526 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Stx1aO35526 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Gm15039-201ENSMUST00000118914 875 ntBASIC17.71■□□□□ 0.43
Stx1aO35526 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Gm22240-201ENSMUST00000175225 82 ntBASIC17.71■□□□□ 0.43
Stx1aO35526 Gm27011-201ENSMUST00000182352 972 ntBASIC17.71■□□□□ 0.43
Stx1aO35526 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.71■□□□□ 0.43
Stx1aO35526 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Stx1aO35526 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Stx1aO35526 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Stx1aO35526 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Stx1aO35526 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Stx1aO35526 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Stx1aO35526 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.7■□□□□ 0.42
Stx1aO35526 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.7■□□□□ 0.42
Stx1aO35526 Mir5130-201ENSMUST00000175160 84 ntBASIC17.7■□□□□ 0.42
Stx1aO35526 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.7■□□□□ 0.42
Stx1aO35526 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.7■□□□□ 0.42
Stx1aO35526 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.7■□□□□ 0.42
Stx1aO35526 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Stx1aO35526 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Stx1aO35526 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stx1aO35526 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.7■□□□□ 0.42
Stx1aO35526 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Stx1aO35526 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.7■□□□□ 0.42
Stx1aO35526 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Stx1aO35526 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Stx1aO35526 Gm6257-201ENSMUST00000163864 910 ntBASIC17.69■□□□□ 0.42
Stx1aO35526 Gm37722-201ENSMUST00000193757 208 ntBASIC17.69■□□□□ 0.42
Stx1aO35526 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.69■□□□□ 0.42
Stx1aO35526 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.69■□□□□ 0.42
Stx1aO35526 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.69■□□□□ 0.42
Stx1aO35526 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Stx1aO35526 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stx1aO35526 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Stx1aO35526 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms