Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clk3O35492 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clk3O35492 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Clk3O35492 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.03■□□□□ -0
Clk3O35492 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clk3O35492 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clk3O35492 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clk3O35492 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Clk3O35492 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.02■□□□□ -0
Clk3O35492 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Clk3O35492 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Clk3O35492 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Mir770-201ENSMUST00000103252 94 ntBASIC15.02■□□□□ -0
Clk3O35492 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.02■□□□□ -0
Clk3O35492 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.02■□□□□ -0
Clk3O35492 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clk3O35492 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Clk3O35492 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.02□□□□□ -0.01
Clk3O35492 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Clk3O35492 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clk3O35492 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Clk3O35492 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Clk3O35492 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clk3O35492 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clk3O35492 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15□□□□□ -0.01
Clk3O35492 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clk3O35492 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clk3O35492 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15□□□□□ -0.01
Clk3O35492 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15□□□□□ -0.01
Clk3O35492 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clk3O35492 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15□□□□□ -0.01
Clk3O35492 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Clk3O35492 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clk3O35492 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms