Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.09■□□□□ 0.33
Clk2O35491 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Gm9682-201ENSMUST00000197505 556 ntBASIC17.09■□□□□ 0.33
Clk2O35491 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.09■□□□□ 0.33
Clk2O35491 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clk2O35491 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clk2O35491 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk2O35491 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clk2O35491 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk2O35491 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk2O35491 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk2O35491 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk2O35491 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clk2O35491 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.08■□□□□ 0.32
Clk2O35491 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.08■□□□□ 0.32
Clk2O35491 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.08■□□□□ 0.32
Clk2O35491 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clk2O35491 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clk2O35491 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clk2O35491 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clk2O35491 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Clk2O35491 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk2O35491 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.08■□□□□ 0.32
Clk2O35491 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.07■□□□□ 0.32
Clk2O35491 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Clk2O35491 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Clk2O35491 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clk2O35491 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.07■□□□□ 0.32
Clk2O35491 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.07■□□□□ 0.32
Clk2O35491 Gm27300-201ENSMUST00000184085 97 ntBASIC17.07■□□□□ 0.32
Clk2O35491 Gm27335-201ENSMUST00000184758 97 ntBASIC17.07■□□□□ 0.32
Clk2O35491 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.07■□□□□ 0.32
Clk2O35491 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.07■□□□□ 0.32
Clk2O35491 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clk2O35491 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk2O35491 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.07■□□□□ 0.32
Clk2O35491 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clk2O35491 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.06■□□□□ 0.32
Clk2O35491 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Gm14494-201ENSMUST00000118786 435 ntBASIC17.06■□□□□ 0.32
Clk2O35491 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.06■□□□□ 0.32
Clk2O35491 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clk2O35491 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.06■□□□□ 0.32
Clk2O35491 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms