Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.33□□□□□ -0.44
Tnfsf11O35235 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf11O35235 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.32□□□□□ -0.44
Tnfsf11O35235 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.32□□□□□ -0.44
Tnfsf11O35235 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf11O35235 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.31□□□□□ -0.44
Tnfsf11O35235 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Gm36967-201ENSMUST00000193814 266 ntBASIC12.31□□□□□ -0.44
Tnfsf11O35235 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf11O35235 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Gm10698-201ENSMUST00000182663 604 ntBASIC12.3□□□□□ -0.44
Tnfsf11O35235 Gm18115-201ENSMUST00000221209 621 ntBASIC12.3□□□□□ -0.44
Tnfsf11O35235 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf11O35235 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms