Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hdac1O09106 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.74■□□□□ 0.59
Hdac1O09106 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.74■□□□□ 0.59
Hdac1O09106 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.74■□□□□ 0.59
Hdac1O09106 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hdac1O09106 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac1O09106 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.73■□□□□ 0.59
Hdac1O09106 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.73■□□□□ 0.59
Hdac1O09106 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.73■□□□□ 0.59
Hdac1O09106 Gm18101-201ENSMUST00000215769 548 ntBASIC18.73■□□□□ 0.59
Hdac1O09106 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac1O09106 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Hdac1O09106 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.72■□□□□ 0.59
Hdac1O09106 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Hdac1O09106 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.72■□□□□ 0.59
Hdac1O09106 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hdac1O09106 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hdac1O09106 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac1O09106 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.71■□□□□ 0.59
Hdac1O09106 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.71■□□□□ 0.59
Hdac1O09106 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.71■□□□□ 0.59
Hdac1O09106 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hdac1O09106 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.71■□□□□ 0.59
Hdac1O09106 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac1O09106 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hdac1O09106 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.7■□□□□ 0.58
Hdac1O09106 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Hdac1O09106 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.7■□□□□ 0.58
Hdac1O09106 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hdac1O09106 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac1O09106 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms