Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.19■□□□□ 0.18
Trove2O08848 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trove2O08848 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trove2O08848 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.19■□□□□ 0.18
Trove2O08848 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trove2O08848 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trove2O08848 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trove2O08848 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trove2O08848 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trove2O08848 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.18■□□□□ 0.18
Trove2O08848 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trove2O08848 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.18■□□□□ 0.18
Trove2O08848 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.18■□□□□ 0.18
Trove2O08848 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.18■□□□□ 0.18
Trove2O08848 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Gm43799-201ENSMUST00000201845 579 ntBASIC16.18■□□□□ 0.18
Trove2O08848 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.18■□□□□ 0.18
Trove2O08848 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trove2O08848 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trove2O08848 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.18■□□□□ 0.18
Trove2O08848 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trove2O08848 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trove2O08848 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trove2O08848 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
Trove2O08848 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trove2O08848 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trove2O08848 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
Trove2O08848 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trove2O08848 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Gm15565-201ENSMUST00000118890 427 ntBASIC16.16■□□□□ 0.18
Trove2O08848 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.16■□□□□ 0.18
Trove2O08848 Gm7889-201ENSMUST00000185591 958 ntBASIC16.16■□□□□ 0.18
Trove2O08848 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.16■□□□□ 0.18
Trove2O08848 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trove2O08848 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.16■□□□□ 0.18
Trove2O08848 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trove2O08848 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms